ESMfold

Inputs and outputs

• Upload FASTA files or select a dataset; everything mounts under /inputs.
• Job outputs and logs are written to /outputs for download.

Example arguments

Process all FASTA files in your upload folder:

-I=/inputs
--chunk-size=128
--max-tokens-per-batch=2048

Batch mode is -I=<dir> where <dir> holds multiple input FASTA files.

Target a single file with -i=/inputs/example.fasta and tune the batch size if you hit memory limits.

Submit

Queue a run from New Job -> ESMfold.