AlphaFold 2
Structure prediction with official weights and managed databases.
Service-managed flags
The platform fixes critical paths and GPU settings so the container wiring stays stable:
--data_dir,--output_dir,--template_mmcif_dir,--obsolete_pdbs_path--pdb70_database_path,--uniref90_database_path,--mgnify_database_path--use_gpu,--gpu_devices,--docker_image_name,--docker_user,--benchmark,--use_precomputed_msas
Example arguments
Select a FASTA under /inputs and supply:
--fasta_paths=/inputs/example.fasta
--model_preset=monomer
--max_template_date=2024-01-01Swap presets (for example monomer_ptm or multimer) and adjust the template cutoff date as needed.
Submit
Start a run from New Job -> AlphaFold 2. Keep inputs under /inputs; outputs are collected from /outputs.